Home > Terms > English (EN) > funnel concept

funnel concept

The new view of the protein folding problem in which the assortment of unfolded polypeptides are considered as an ensemble, the myriad of individual members of which achieve the native form by microscopically unique routes, all funneling down from the high-energy unfolded state to the low energy native conformation. If these molecules, on average, do not encounter an obstacle to refolding, the kinetics appears like the two-state case of the pathway model. Obstacles may be dead ends (kinetic traps) from which the miss-folded protein is extracted by Browninan forces or helped by a chaperonin to reverse to a higher energy state from which it can continue its folding. Another kind of bottleneck is a conformational entropy barrier, when there are only small differences in energy among the various possible conformations each folding polymer can achieve. It would then take some time, on the average, for the partially folded molecules to search the many possible conformations to find a continuation of the folding sequence. By viewing the energy co-ordinate as an energy landscape, folding of specific unfolded proteins may be viewed as passing over plateaus, down steep ravines or trapped in moats. Although the funnel concept, or 'new view' of protein folding was proposed as an alternative to the hypothesis that each protein has only one folding pathway (the 'old view), there in fact may be multiple pathways, but they share many features. see framework model; kinetic partitioning; paradox of Levinthal

0
Collect to Blossary

Member comments

You have to log in to post to discussions.

Terms in the News

Billy Morgan

Sports; Snowboarding

The British snowboarder Billy Morgan has landed the sport’s first ever 1800 quadruple cork. The rider, who represented Great Britain in the 2014 Winter Olympics in Sochi, was in Livigno, Italy, when he achieved the man-oeuvre. It involves flipping four times, while body also spins with five complete rotations on a sideways or downward-facing axis. The trick ...

Marzieh Afkham

Broadcasting & receiving; News

Marzieh Afkham, who is the country’s first foreign ministry spokeswoman, will head a mission in east Asia, the state news agency reported. It is not clear to which country she will be posted as her appointment has yet to be announced officially. Afkham will only be the second female ambassador Iran has had. Under the last shah’s rule, Mehrangiz Dolatshahi, a ...

Weekly Packet

Language; Online services; Slang; Internet

Weekly Packet or "Paquete Semanal" as it is known in Cuba is a term used by Cubans to describe the information that is gathered from the internet outside of Cuba and saved onto hard drives to be transported into Cuba itself. Weekly Packets are then sold to Cuban's without internet access, allowing them to obtain information just days - and sometimes hours - after it ...

Asian Infrastructure Investment Bank (AIIB)

Banking; Investment banking

The Asian Infrastructure Investment Bank (AIIB) is an international financial institution established to address the need in Asia for infrastructure development. According to the Asian Development Bank, Asia needs $800 billion each year for roads, ports, power plants or other infrastructure projects before 2020. Originally proposed by China in 2013, a signing ...

Spartan

Online services; Internet

Spartan is the codename given to the new Microsoft Windows 10 browser that will replace Microsoft Windows Internet Explorer. The new browser will be built from the ground up and disregard any code from the IE platform. It has a new rendering engine that is built to be compatible with how the web is written today. The name Spartan is named after the ...

Featured Terms

Adam.ONeill
  • 0

    Terms

  • 2

    Blossaries

  • 33

    Followers

Industry/Domain: Festivals Category: Spanish festivals

Bous a la Mar

A festival held annually in Spain. The name roughly translates to "Bulls to the Sea". In this festival, participants are tasked with ...